Technical Program | AIChE

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Technical Program 

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Start Time End Time  
June 23, 2025 All Central Daylight Time (CDT)
    Day 1
8:00 AM 12:00 PM Registration + Badge Pick Up 
9:00 AM 9:15 AM Welcome Remarks by Chair: Jeffrey Tabor, Rice University
9:15 AM 10:15 AM KEYNOTE: From benchtop to breweries: Transforming essential medicine supply chains via whole-cell synthetic biochemistry, Christina Smolke, Stanford/Antheia Inc
10:15 AM 10:45 AM Morning Coffee Break 
10:45 AM 12:10 PM Session 1: Biomanufacturing for Sustainability Session Chairs: Tara Karimi, Cemvita & Ingmar Riedel-Kruse, Arizona State University
10:45 AM 10:50 AM Session Introduction by Session Chairs: Tara Karimi, Cemvita & Ingmar Riedel-Kruse, Arizona State University
10:50 AM 11:15 AM Invited Speaker: Scale-up: a transformative phase for a product and company, Muriel Dewilde, Bio Base Europe Pilot Plant
11:15 AM 11:40 AM Invited Speaker: Synthetic biology tools for bioenergy-relevant microbes, Carrie Eckert, ORNL
11:40 AM 11:55 AM Selected Abstract: Developing Cutting-Edge Toolkits to Harness the Power of Non-Conventional Yeast Maudiozyma Bulderi for Sustainable Lactic Acid Production, Reem Swidah, The University of Manchester
11:55 AM 12:10 PM Selected Abstract: Engineering Non-Model Microbes for Upcycling Plastic Waste on Earth and for Space Exploration, Tae Seok Moon, J. Craig Venter Institute
12:10 PM 1:10 PM Lunch & Beckman Coulter & Twist Biosciences Sponsored Panel Moderated by Jeff Tabor, Rice University: Commercializing Synthetic Biology: How Our Technology and Research Are Being Applied in the Real World
12:10 PM 12:25 PM Attendees Grab Lunch 
12:25 PM 12:40 PM Sponsored Talk: Tools to Drive DBTL Efficiently, De-Risk Scale-Up, and Prioritize High-Quality Data.

Enabling smarter biomanufacturing decisions through automation, precision, and robust data integrity.


Maria Savino, Beckman Coulter 
12:40 PM 12:55 PM Sponsored Talk: DN/Ai. How Gene Synthesis is evolving to support the new AI driven biotech industry, Esteban Toro, Twist Biosciences 
12:55 PM 1:10 PM Q&A Discussion 
1:10 PM 2:35 PM Session 2: Automation for Synthetic Biology; Session Chairs: Emma Chory, Duke University & Michael Clear, Schmidt Sciences
1:10 PM 1:15 PM Session Introduction by Session Chairs: Emma Chory, Duke University & Michael Clear, Schmidt Sciences
1:15 PM 1:40 PM Invited Speaker: Arvind Ramanathan, Argonne National Lab
1:40 PM 2:05 PM Invited Speaker: Emma Chory, Duke University
2:05 PM 2:20 PM Selected Abstract: Toehold VISTA: A Versatile Approach to Decipher Programmable RNA Sensor-Target Interactions Facilitated By an Automated Riboregulator Assembly Pipeline, James Robson, Boston University
2:20 PM 2:35 PM Selected Abstract: Machine Learning Guided Ultra-High Throughput Characterization of Entire Genetic Design Spaces in Mammalian Cells, Kshitij Rai, Rice University
2:35 PM 2:50 PM Selected Abstract: An Automated Workflow for Designing Modular and Tunable Molecular Biosensors Using Aptamer-Regulated Transcription, Heonjoon Lee, Johns Hopkins University School of Medicine
2:50 PM 3:20 PM Afternoon Coffee Break
3:20 PM 3:45 PM Lightning Talks Moderated by Tara Karimi, Cemvita
3:20 PM 3:25 PM Lightning Talk: Adaptive Laboratory Evolution and Metabolic Engineering of Cupriavidus Necator for Sustainable Microbial Protein Production, Eric C. Holmes, National Renewable Energy Laboratory
3:25 PM 3:30 PM Lightning Talk: Functional Plasticity of HCO3– uptake and CO2 Fixation in Cupriavidus Necator H16, Justin Panich, Lawrence Berkeley National Laboratory
3:30 PM 3:35 PM Lightning Talk: Evolution Guided Tolerance Engineering of Pseudomonas Putida for Production of the Sustainable Drop-in Biofuel Isoprenol, Aparajitha Srinivasan, Lawrence Berkeley National Lab
3:35 PM 3:40 PM Lightning Talk: Microfluidic DNA Data Storage Architecture with Multiplexed Random Access and Dynamic File Management, Muhammad Hassan Raza, North Carolina Agricultural and Technical State University
3:40 PM 3:45 PM Lightning Talk: A Bioelectrochemical Crossbar Architecture Screening Platform (BiCASP) for Screening of Quinones Using Lactiplantibacillus Plantarum, Hasika Suresh, Tufts University
3:45 PM 3:50 PM Introduction to Rice University's Cocktail Reception by Caleb Bashor
3:50 PM 4:50 PM Cocktail Reception Sponsored by Rice University + Poster Session 1
     
Start Time End Time  
June 24, 2025 All Central Daylight Time (CDT)
    Day 2
8:00 AM 12:00 PM Registration + Badge Pick Up 
9:00 AM 9:05 AM Welcome Remarks by Chair: Jeffrey Tabor, Rice University
9:05 AM 10:05 AM KEYNOTE: Synthetic biology for people and planet health, Michael Jewett, Stanford University
10:05 AM 10:35 AM Morning Coffee Break 
10:35 AM 12:00 PM Session 3: Molecular Engineering and Evolution; Session Chair: Katie Galloway, MIT
10:35 AM 10:40 AM Introduction to Session by Session Chair: Katie Galloway, MIT
10:40 AM 11:05 AM Invited Speaker: Alexandre Zanghellini, Arzeda
11:05 AM 11:30 AM Invited Speaker: High-Resolution and Programmable RNA-in and RNA-out Genetic Circuit in Living Mammalian Cells, Chunbo Lou, Chinese Academy of Science
11:30 AM 11:45 AM Selected Abstract: High-Throughput Domain Insertion Libraries to Engineer Allosteric Splicing Ribozymes for Modular Broad-Host Range Genetic Control, Genetic Recordings, and Biosensing, August Staubus, Rice University
11:45 AM 12:00 PM Selected Abstract: Advancing Vaccine Innovation: Development of a High-Throughput Protein Engineering Platform for Virus-like Particles, Chunyu Wu, Merck & Co., Inc.
12:00 PM 12:15 PM Selected Abstract: Systematic Design of Genetic Systems for Non-Model Microbes of Clinical and Biotechnological Relevance, Christopher. D Johnston, UT MD Anderson
12:15 PM 1:15 PM Lunch
12:15 PM 12:45 PM Attendees Grab Lunch 
12:45 PM 1:15 PM Introduction to NIH/NIBIB and funding opportunities in Synthetic Biology, Jermont Chen, NIH/NIBIB
1:15 PM 2:40 PM Session 4: Building With Biology; Session Chairs: Ingmar Riedel-Kruse, Arizona State University & Keith Keitz, University of Texas
1:15 PM 1:20 PM Introduction by Session Chair: Ingmar Riedel-Kruse, Arizona State University & Keith Keitz, University of Texas
1:20 PM 1:45 PM Invited Speaker: Solving the Grand Challenge of Tumor-Specific Therapies with Logic-Gated Cells, Timothy Lu, MIT
1:45 PM 2:10 PM Invited Speaker: Building a Sustainable Biomanufacturing Platform, Harish Nagarajan, Genomatica
2:10 PM 2:25 PM Selected Abstract: Phase Separation for Designing Synthetic Gene Circuits Robust to Host Context, Xiaojun Tian, Arizona State University
2:25 PM 2:40 PM Selected Abstract: Intercellular DNA Communication for Bio-Computation in Synthetic Bacterial Consortia, Manish Kushwaha, INRAe, University of Paris Saclay
2:40 PM 3:10 PM Afternoon Coffee Break
3:10 PM 3:40 PM Lightning Talks Moderated By Jeffrey Tabor, Rice University
3:10 PM 3:15 PM Lightning Talk: Engineering Multi-Layered Post-Transcriptional Synthetic Gene Circuits with Sponge RNAs for Novel Control of Gene Expression in E. coli, Scott Stacey, University of Oxford
3:15 PM 3:20 PM Lightning Talk: Engineering Pattern Formation in Bacteria, Jung Hun Park, University of Lausanne
3:20 PM 3:25 PM Lightning Talk: High-Throughput In Vivo DNA Engineering By Bacterial Conjugation, Po-Hsiang Hung, BacStitch DNA, Inc., Stanford University
3:25 PM 3:30 PM Lightning Talk: Engineering ligand-Binding Receptor for Establishing Synthetic Symbiosis between Non-Host Plants and Ectomycorrhizal Fungi, Ruchika Rajput, Oak Ridge National Laboratory
3:30 PM 3:35 PM Lightning Talk: Increasing the Stability of Trans-Splicing Ribozymes That Activate Protein Translation for Community-Level Programming., David L. Gillett, Rice University
3:35 PM 3:40 PM Lightning Talk: Highly Parallelized Detection of Compounds with Whole-Cell Microbial Biosensors Integrated in Microfluidic Device, Hann Tu, Northeastern University
3:40 PM 4:40 PM Poster Session 2
     
Start Time End Time  
June 25, 2025 All Central Daylight Time (CDT)
    Day 3
8:00 AM 12:00 PM Registration + Badge Pick Up 
9:00 AM 9:05 AM Welcome Remarks by Chair: Jeffrey Tabor, Rice University
9:05 AM 10:05 AM KEYNOTE: Orthogonal biomanufacturing using acyl-CoA elongation biochemistries, Ramon Gonzales, Mojia Biotech
10:05 AM 10:35 AM Morning Coffee Break 
10:35 AM 12:00 PM Session 5: Environmental Synthetic Biology; Session Chairs: Keith Keitz, University of Texas & Michael Clear, Schmidt Sciences
10:35 AM 10:40 AM Session Introduction by Session Chairs: Keith Keitz, University of Texas & Michael Clear, Schmidt Sciences
10:40 AM 11:05 AM Invited Speaker: Cecilia Martinez-Gomez, UC Berkeley
11:05 AM 11:30 AM Invited Speaker:  Reimagining Forest Pathology: Leveraging Synthetic Biology to Combat Fungal Invasions, Joanna Tannous, Oak Ridge National Laboratory
11:30 AM 11:45 AM Selected Abstract: Synthetic Microbial Co-Cultures for Modular Bioelectronic Sensing in Diverse Environments, Siliang Li, Rice University
11:45 AM 12:00 PM Selected Abstract: Discovery of Natural Competence Enables Genetic Engineering of a Bee Gut Symbiont, A H M Zuberi Ashraf, The University of Texas at Austin
12:00 PM 12:15 PM A Synthetic Platform for Multiplex Screening of Cell-Cell Communication between Soil Fungi, Giovanni Schiesaro, Technical University of Denmark
12:15 PM 1:15 PM Lunch
1:15 PM 2:40 PM Session 6: Plant Synthetic Biology; Session Chair: Gozde Demirer, Caltech
1:15 PM 1:20 PM Session Introduction by Session Chair: Gozde Demirer, Caltech
1:20 PM 1:45 PM Invited Speaker: Jennifer Brophy, Stanford University
1:45 PM 2:10 PM Invited Speaker: Using Cell-Free Prototyping and Plant Genome Engineering to Produce Plant-Based Metabolites, Quentin Dudley, University of Wisconsin-Madison
2:10 PM 2:25 PM Selected Abstract: Plant and Yeast Bioengineering Unveils Glycosyl Hydrolases for Soluble Fiber Production, Talia Jacobson, University of Florida
2:25 PM 2:40 PM Selected Abstract: Continuous Directed Evolution of Soybean (Glycine max) Sbpase, Ignacio Sparrow Munoz, University of Illinois Urbana Champaign
2:40 PM 2:55 PM Selected Abstract: Extracellular contractile injection systems to deliver functional proteins to plant cells, Mark Legendre, Caltech
2:55 PM 3:25 PM Afternoon Coffee Break
3:25 PM 4:25 PM Session 7: Synthetic Biology for Cell and Gene Therapy; Session Chairs: Tara Deans, Georgia Tech & Junghae Suh, Biogen
3:25 PM 3:30 PM Session Introduction by Session Chairs: Tara Deans, Georgia Tech & Junghae Suh, Biogen
3:30 PM 3:55 PM Invited Speaker: Caleb Bashor, Rice University
3:55 PM 4:10 PM Selected Abstract: Transfer: Programmable Macromolecule Delivery Via Engineered Trogocytosis, Xinyi Chen, Stanford University
4:10 PM 4:25 PM Selected Abstract: Monitoring In Vivo Transcription with Synthetic Serum Markers, Sho Watanabe, Rice University
4:25 PM 4:40 PM Selected Abstract: Autoimmune Disease Management through IL-23 Responsive Cell Sensors, Gabriela Garza, University of Michigan
4:40 PM 5:10 PM Lightining Talks Moderated By Gozde Demirer, Caltech
4:40 PM 4:45 PM Lightning Talk: A Comprehensive Platform for Pathway Analysis, Omics Integration, and Data-Driven Design, Peter Karp, SRI International
4:45 PM 4:50 PM Lightning Talk: Sequence Display-Enabled Machine Learning for Protein Evolution, Linqi Cheng, Rice University
4:50 PM 4:55 PM Lightning Talk: Deep Learning-Guided De Novo Design of RNA Translational Control Elements in Human Cells, Nayoung Kim, Harvard University, Massachusetts Institute of Technology, Broad Institute of MIT and Harvard
4:55 PM 5:00 PM Lightning Talk: Empowering Synthetic Biology with Biocyc: A Comprehensive Platform for Pathway Analysis, Omics Integration, and Data-Driven Design, Ron Caspi, SRI International
5:00 PM 5:05 PM Lightning Talk: Resource Efficient Enzyme Engineering Using Functionally Interpretable Latent Representations Coupled with Bayesian Optimization, Ayaan Hossain, Tessera Therapeutics
5:05 PM 5:10 PM Lightning Talk: Application of a Fully Synthetic Golden Gate Assembly System to the Rapid and Flexible Engineering of Opportunistic Human Pathogen Pseudomonas Aeruginosa Phage Phikmv, Gregory J. S. Lohman, New England Biolabs, Inc.
5:10 PM 6:10 PM Poster Session 3
     
Start Time End Time  
June 26, 2025 All Central Daylight Time (CDT)
    Day 4
8:00 AM 12:00 PM Registration + Badge Pick Up 
9:00 AM 9:05 AM Welcome Remarks by Chairs: Jeffrey Tabor, Rice University
9:05 AM 10:05 AM KEYNOTE: Building a Biofoundry to Accelerate Biotechnology from Extreme & Exceptional Microorganisms, Michelle O'Malley, UCSB
10:05 AM 10:35 AM ACS SynBio Young Innovator Award: Making and Breaking Proteins: New Tools for Cell Biology and Cellular Engineering, John Ngo, Boston University
10:35 AM 11:05 AM Morning Coffee Break 
11:05 AM 12:30 PM Session 8: AI and Computation for Synthetic Biology; Session Chairs: Jeffrey Tabor, Rice University & Emma Chory, Duke University
11:05 AM 11:10 AM Session Intrudction by Session Chairs: Jeffrey Tabor, Rice University & Emma Chory, Duke University
11:10 AM 11:35 AM Invited Speaker: Genetic Systems Calculator: Automated Many-Model Design of Complex Genetic Systems & Libraries, Howard Salis, Pennsylvania State University
11:35 AM 12:00 PM Invited Speaker: Lingchong You, Duke University
12:00 PM 12:15 PM Selected Abstract: Machine Learning-Driven Exploration of Cell-Free Composition to Maximize RNA Production and Model Gene Expression Dynamics, Olivier Borkowski, INRAE Micalis Institute
12:15 PM 12:30 PM Selected Abstract: Declarative Bioengineering Platform for the Simplification of Composing Physics and Deep Learning-Based Workflows, Zachary Martinez, California Institute of Technology
12:30 PM 12:45 PM Selected Abstract: Dual-Scale Dynamic Models Render Synthetic Circuit Dyanmics across Growth Stages, Chelsea Hu, Texas A&M University
12:45 PM 12:55 PM Closing Remarks from Chairs:  Jeffrey Tabor, Rice University