Technical Program | AIChE

Technical Program

Please see below for the Technical Program. To view speaker abstracts, click here.

Monday, May 2nd, 2022 National Security
7:00 AM - 12:00 PM Registration and Check-In
8:45 AM - 9:00 AM

Welcoming Remarks

Chris Voigt, Massachusetts Institute of Technology

Melissa Rhoads, Lockheed Martin

9:00 AM - 10:00 AM

Keynote Speaker: Pamela Silver, Harvard University

Designing Biology for Sustainability

10:00 AM - 11:00 AM

Session 1: Defense Applications

Chaired by Sarah Glaven, Naval Research Lab

10:00 AM - 10:30 AM

Invited Speaker: Petra Oyston, dtsl Chemical, Biological and Radiological Division

10:30 AM - 10:45 AM

Rational Engineering of Explosive-Sensing Soil Bacteria 

Invited Speaker: Erin Essington, Penn State University

10:45 AM - 11:00 AM

Microbially-Induced Calcite Precipitation (MICP) from Shelf-Stable Preparations of Bacteria 

Invited Speaker: Matthew Tuttle, U.S. Air Force

11:00 AM - 12:15 PM


12:15 PM - 2:00 PM

Session 2: Bio-manufacturing

Chaired by Michael Smanski, BioMADE

12:15 PM - 12:45 PM

Opportunities to advance Bioindustrial Manufacturing through synthetic biology

Invited Speaker: Michael Smanski, BioMADE

12:45 PM - 1:15 PM

Cost competitive commodity chemicals from crap

Invited Speaker: Sarah Richardson, Microbyre

1:15 PM - 1:45 PM

Chemostat and Adaptive Evolution Approaches to Tune Microbial Biomineralization

Invited Speaker: Bryan Tracy, Superbrewed Foods

1:45 PM - 2:00 PM

Re-Write the Yeast Genome for Customized Biosynthesis Control 

Invited Speaker: Xinyu Lu, Imperial College London

2:00 PM - 2:30 PM Break
2:30 PM - 3:30 PM

Session 3: Pandemic Response

Chaired by Renee Wegrzyn, Gingko Bioworks

2:30 PM - 3:00 PM

A Systems Integrations Approach to Pandemic Response

Invited Speaker: Renee Wegrzyn, Gingko Bioworks

3:00 PM - 3:30 PM

Platform Technologies for Pandemic Response

Invited Speaker: Jimmy Gollihar, Houston Methodist Research Institute

3:30 PM - 4:30 PM Rapid Fire Presentations A
4:30 PM - 5:30 PM Poster Session A and Reception
  Harmony 2022: Software Tools Workshop
7:00 PM - 9:00 PM Organized by Chris Myers, University of Colorado Boulder
Tuesday, May 3rd, 2022 Agriculture and the Environment
7:00 AM - 8:30 AM Registration / Check-In
8:30 AM - 9:30 AM

Discovery, Design, and Engineering of Plant Chemistry

Keynote Speaker: Elizabeth Sattely, Stanford

9:30 AM - 10:00 AM Coffee Break
10:00 AM - 11:30 AM

Session 4: Plant Synthetic Biology

Chaired by Jenn Brophy, Stanford

10:00 AM - 10:30 AM

Engineering plant root structure using synthetic genetic circuits

Invited Speaker: Jenn Brophy, Stanford

10:30 AM - 11:00 AM

Faster and higher: from synthetic promoter to engineered plants.

Invited Speaker: Neal Stewart, UTK

11:00 AM - 11:30 AM

Programmable Plant-Microbe Communication

Invited Speaker: Christopher Voigt, MIT

11:30AM to 12:15 PM Lunch
12:15 PM - 1:00 PM

Sponsored Round Table - Inscripta

Screening and Selection – How to Best Phenotype your Experiment

1:00 PM - 2:30 PM

Session 5: Engineering Insects

Chaired by Ophelia Venturelli, University of Wisconsin

1:00 PM - 1:30 PM

High-throughput mapping of biomolecular fitness landscapes

Invited Speaker: Kevin Esvelt, MIT

1:30 PM - 2:00 PM

Engineering honey bee symbionts to protect pollinator health

Invited Speaker: Jeffrey Barrick, UT Austin

2:00 PM - 2:30 PM

Genetic Control of Agricultural Insect Pests

Invited Speaker: Max Scott, NCSU   

2:30 PM - 3:00 PM Break
3:00 PM - 4:15 PM

Session 6: Harnessing Soil Communities

Chaired by Harris Wang, Columbia University

3:00 PM - 3:30 PM

Invited Speaker: Ophelia Venturelli, University of Wisconsin

Designing synthetic human gut microbiomes 

3:30 PM - 3:45 PM

Design and Testing Sequence Entanglement for Biocontainment to Prolong Synthetic Gene Stability and Limit Horizontal Gene Transfer 

Invited Speaker: Yongqin Jiao, Lawrence Livermore National Laboratory

3:45 PM - 4:15 PM

Fungal Highways Enable Migration and Communication of Engineered Bacteria in Soil 

Invited Speaker: Eric Young, Worcester Polytechnic Institute

4:15 PM - 5:15 PM Rapid Fire Presentations B
5:15 PM - 6:15 PM Poster Session B
Wednesday, May 4th, 2022 Programmable Medicines
7:30 AM - 8:30 AM Registration / Check-In
8:30 AM - 9:30 AM

Engineering Therapeutic Bacteria To Treat Cancer

Keynote Speaker: Tal Danino, Columbia University

9:30 AM - 10:00 AM Break
10:00 AM - 12:30 PM

Session 7: Therapeutic Bacteria

Chaired by Michael Jewett, Northwestern

10:00 AM - 10:30 AM

ACSSB Award Lecture (presented by Michael Jewett) 

Invited Speaker: Neha Kamat, Northwestern

10:30 AM - 11:00 AM

Biomolecular ultrasound for cellular imaging and remote control

Invited Speaker: Mikhail Shapiro, CalTech

11:00 AM - 11:30 AM

Cell-free systems for distributed biomaking

Invited Speaker: Michael Jewett, Northwestern

11:30 AM - 12:00 PM

Engineered E. coli Nissle for the treatment of inborn errors of amino acid metabolism

Invited Speaker: Vincent Isabella, Synlogic

12:00 PM - 12:15 PM

Genetically Engineered Microbial Medicines (GEMMs) for the Treatment of Chronic Diseases

Invited Speaker: Will DeLoache, Novome

12:15 PM - 12:30 PM

Electrifying Probiotics: Synthetic Regulation of Extracellular Electron Transfer in Lactic Acid Bacteria 

Invited Speaker: Siliang Li, Rice University

12:30 - 1:30 PM


1:30 PM - 2:45 PM

Session 8: Engineering Human Cells

Chaired by Tal Danino, Columbia

1:30 PM - 2:00 PM

Harnessing supercoiling-mediated feedback to enhance cellular programming

Katie Galloway, MIT

2:00 PM - 2:15 PM

Optimizing and Controlling Glycosylation of Biologics through Systems and Synthetic Biology 

Invtied Speaker: Nathan Lewis, UC San Diego

2:15 PM - 2:30 PM

Transient Gene Delivery Via Domesticated Influenza A Virus 

Invited Speaker: Adam Sychla, University of New Mexico

2:30 PM - 2:45 PM

Programming Off-the-Shelf Human iPSCs Using Genome Writing

Invited Speaker: David Truong, New York University

2:45 PM - 3:30 PM Break
3:30 PM - 5:00 PM

Session 9: Foundations - Design of Regulatory Networks

Chaired by Neha Kamat, Northwestern

3:30 PM - 4:00PM

Context-aware synthetic biology by controller design

Invited Speaker: Domitilla Del Vecchio, Massachusetts Institute of Technology

4:00 PM - 4:30 PM

Engineering Intelligent Chassis Cells

Invited Speaker: Corey Wilson, Georgia Tech

4:30 PM - 4:45 PM

Cross-Kingdom Signaling of P2X2 Ion Channels for High Throughput 

Invited Speaker: Andrew Ellington, UT Austin

4:45 PM - 5:00 PM

Engineering Intracellular Liquid Protein Materials for Tuning Transgene Expression 

Invited Speaker: Wilfried Weber, University of Freiburg

5:00 PM - 6:00 PM Rapid Fire Presentations C
6:00 PM - 7:00 PM Poster Session C and Reception
Thursday, May 5th, 2022 Environment and Circular Economy
7:30 AM - 8:30 AM Registration / Check-In
9:30 AM - 11:00 AM

Session 10: Environment and Climate

Chaired by Michael Köpke, LanzaTech

9:30 AM - 10:00 AM

Stepping On The Gas Towards A Circular Economy: Engineering Gas Fermenting Organisms For Carbon-Negative Biomanufacturing

Invited Speaker: Michael Köpke, LanzaTech

10:00 AM - 10:30 AM

Programming Bacteria as Real-time Environmental Sensors and Sustainable Materials

Invited Speaker: Caroline Ajo-Franklin, Rice University

10:30 AM - 11:00 AM


11:00 AM - 1:30 PM

Session 11: Living Materials

Chaired by Caroline Ajo-Franklin, Rice University

11:00 AM - 11:30 AM

Engineering living and regenerative fungal-bacterial biocomposite structures

Invited Speaker: Harris Wang, Columbia University

11:30 AM - 12:00 PM

Freeform printing of complex living materials using a low-cost DIY 3D bioprinter

Invited Speaker: Anne Meyer, Rochester

12:00 PM - 12:15 PM

Episome-Based Gene Expression Modulation Platform in the Model Diatom Phaeodactylum Tricornutum 

Invited Speaker: Tessema Kassaw, Colorado State University

12:15 PM - 12:30 PM

Bioelectronic Control of a Microbial Community Using Surface-Assembled Electrogenetic Cells to Route Signals 

Invited Speaker: Tanya Tschirhart, US Naval Research Lab

12:30 PM - 1:30 PM Lunch
1:30 PM - 4:15 PM

Session 12: Foundations - Simulation and Prototyping

Chaired by Richard Murray

1:30 PM - 1:45 PM

Burden-Driven Multicellular Feedback Control for Microbial Consortia 

Invited Speaker: Alice Boo, Imperial College London

1:45 PM - 2:00 PM

Integrase-Mediated Differentiation Circuits Improve Evolutionary Stability of Burdensome and Toxic Functions in E. coli 

Invited Speaker: Rory Williams, Caltech

2:00 PM - 2:15 PM

Constructor Algorithms for Building Unconventional Computers Able to Efficiently Solve NP-Complete Problems 

Invited Speaker: Anthony J McCaffrey, Constructor Algorithms

2:15 PM - 2:30 PM

Nusabre: A Novel Deep-Learning Framework for Sequence Modeling and Design in RNA Synthetic Biology 

Invited Speaker: Pradeep Ramesh, Sherlock Biosciences

2:30 PM - 2:45 PM

Ultradeep Sequence-Function Mapping Enables Novel Insights into Bacterial Translation 

Invited Speaker: Markus Jeschek, ETH Zurich

2:45 PM - 3:00 PM

Bayflux: A Bayesian Method to Quantify Fluxes at the Genome Scale 

Invited Speaker: Tyler Backman, Joint BioEnergy Institute

3:00 PM - 3:15 PM Break
3:15 PM - 3:45 PM

The E. coli Whole-Cell Modeling Project

Invited Speaker: Markus Covert, Stanford

3:45 PM - 4:15 PM

Approaching Sequence Completeness: Model-predictive Design of Genetic Systems

Invited Speaker: Howard Salis, Penn State

4:15 PM - 4:30 PM Closing Remarks

Session/Rapid Fire A - Monday, May 2nd: 3:30 - 5:30
ID Abstract Title Presenting Author
640969 Factors Influencing Enhanced Glycolysis after Confinement on Nanoscaffolds Joyce Breger
641013 Different Photosynthetic Regulations of Synechocystis Sp. PCC 6803 in Response to High-Light and Low-Temperature Stress Sang-Hyeok Cho
641015 Using Artificial Neural Network Type Architecture in E. coli Populations to Implement Complex Computational Functions at the Population Level Deepro Bonnerjee
641050 Survival and Function of Engineered Organisms in Model Soil Environments Natalie Farny
641106 Inducible Directed Evolution of Complex Phenotypes in Bacteria Ibrahim Al'Abri
641108 Engineering E. coli Nissle 1917 to Consume Uric Acid in the GI Tract Sean Cotton
641127 Genetically Encodable Control of the Clustering State of Acoustic Protein Nanostructures Zongru Li
641144 A Recurrent Neural Network Model Development for Lettuce Growth Prediction Asher Altman
641200 Use of a Cell-Free Protein Synthesis System and Coupled Enzyme Reactions to Synthesize Novel Natural Product-like Compounds Alexander Ditzel
641221 Accelerated Engineering of Industrial Microorganisms Facilitated By Machine Learning Michael Fonstein
641226 In Vivo Screening for the Identification and Characterization of Prokaryotic, Metabolite-Responsive Transcription Factors Amber Bernauw
641228 Fpcountr: Absolute Quantification of Fluorescent Proteins for Synthetic Biology Eszter Csibra
641230 Exploring the Toggle Switch Motif for Synthetic Spatiotemporal Patterning Içvara Barbier
641246 Engineering a Growth Rate Controller in E. coli Via the Ppgpp Pathway Carlos Barajas
641248 Developing a Thermosensitive Biocontainment System for Gut Microbiome Gene-Editing Plasmids Gary Foo
641251 Engineering a Biological Land Pump for Giga-Scale CO2 Sequestration Harry Adamson
641254 Development of SYNB1353v1, a Synthetic Biotic Engineered to Consume Methionine for the Treatment of Homocystinuria Jillian Means
641255 Biosensor-Enabled Optimization of SYNB1934, a Synthetic Biotic for Phenylketonuria Demonstrating Clinical Efficacy Catherine Monahan
641260 A Synthetic Biotic, SYNB8802, Lowers Urinary Oxalate in Preclinical Models and Healthy Volunteers with Induced Dietary Hyperoxaluria David Lubkowicz
641279 Disruption of the Spatial Architecture of the MalT Regulon Reveals How Transcriptional Noise Affects Population Fitness in E. coli Anja Ehrmann
641284 Engineering Bacillus Subtilis for Applications Beyond the Laboratory Monica Chu
641288 Engineered Bacterial Swarm Patterns As Spatial Records of Environmental Inputs Anjali Doshi
641298 Evolving G-Protein Coupled Receptors for Rapid Point-of-Care Detection of Candida auris Using Yeast-Based Biosensors Andrea Clausen Lind
641303 Activating Silent Biosynthetic Gene Clusters in Streptomyces Spp. with CRISPR Tools Andrea Ameruoso
641304 Second-Generation Acoustic Reporter Genes Enable Ultrasound Imaging of Engineered Bacteria Colonizing Tumors and the Gastrointestinal Tract Marjorie Buss
641312 Exploring In Vivo and in Vitro Biosynthesis to Improve 1,3-Diaminopropane Production Gregory Ellis
641331 Engineering a Synthetic Dnazyme-Based Operon-like System for Protein Organization within Living Bacteria Using ssDNA Scaffolds Dan Mark Alon
641340 A Synthetic Yeast GPCR Juxtacrine Signalling Toolbox for Programmable Multicellular Structures Fankang Meng
641353 De Novo Biosynthesis of the Non-Standard Amino Acid Para-Nitrophenylalanine Neil Butler
641356 Programmable Synthetic Biomolecular Condensates for Cellular Control Yifan Dai
641360 The Synswitch: A Synthetic Feed-Forward Circuit to Engineer a Stable Inducible HEK293 AAV Producer Cell Line. Giuliano De Carluccio
641381 Engineering Speciation for Population Suppression of an Invasive Insect Pest Nate Feltman
641390 Local Delivery of Synthetic Biotic Medicines to Treat Inflammatory Bowel Disease Aida Kalantari
641394 Engineering Bmor As a Biosensor for Butyrate in the Gut Nishit Banka
641401 Single-Walled Carbon Nanotube Probes for the Characterization of Biofilm-Degrading Enzymes Demonstrated Against Pseudomonas Aeruginosa Extracellular Matrices Sparsh Agarwal
641404 A Synthetic Biology Toolbox for Electronic Control of Gene Expression Alicia Climent Catala
641412 Design and Characterization of Crispri-Based Circuits for the Inhibition of Antibiotic Resistance Genes Angelica Frusteri Chiacchiera
641420 Dntegrate: An Open-Source Python Package for Performing DNA Assemblies with the OT-2 Liquid Handling Robot John Bryant
641424 Using Fungible Biosensors to Evolve Improved Alkaloid Biosyntheses Simon d'Oelsnitz
641427 Investigating Polysaccharide Utilization Loci As a Control Knob for Manipulating Metabolism of Gut Microbiota Jun Feng
641428 Rapid and Simple Cell-Free Protein Synthesis Workflow for Protein Engineering Aaron Clausen
641432 A Reporter System for Optimizing the Lysate-Based Cell-Free Expression and Post-Translational Modification of Non-Ribosomal Peptide Synthetases Jaime Lorenzo N. Dinglasan
641447 Towards Sensing of Breast Cancer Biomarkers: Engineering Glucose Dehydrogenase As an Estrogenic Regulated Protein Rong Cai
641453 Programming Bacteria to Sense Environmental DNA for Multiplexed Pathogen Detection Yu-Yu Cheng
641470 Compact dCas9-Deaminase Mediated Lineage Tracing Mechanism in Bacteria Peter Diebold
641494 Phage- and Robotics-Assisted Directed Evolution Emma Chory
641654 A Fully Integrated High-Throughput Automation Solution for End-to-End DNA Assembly Angela Tarver
641660 Modulating Intracellular Space-Filling to Fine-Tune Gene Regulatory Interactions Stefano Grasso
641698 A Pipeline for the Evolution and Delivery of Therapeutic Cargo By Salmonella Marc Biarnes Carrera
641705 Expanding Biosensor Capabilities to Assess and Augment Human Performance Amy M. Ehrenworth Breedon
641720 Putative Phenotypically Neutral Genomic Insertion Points in Prokaryotes Casey Bernhards

Session/Rapid Fire B - Tuesday, May 3:  4:15 - 6:15
ID Abstract Title Presenting Author
641701 Reductive Enzyme Cascades for Valorization of PET Depolymerization Products Guided By the Specificity of Carboxylic Acid Reductases Madan Gopal
641444 Engineering Strategies to Improve Therapeutic Protein Secretion in Probiotic Yeast Saccharomyces Boulardii Deniz Durmusoglu
641403 Enabling Massively Parallel Part Characterization in Robust Microbes Sean Halper
641239 Functionalizing Conjugative Systems from Metagenomic Data for Engineering of Microbial Genomes Thomas A. Hamilton
641376 Engineering a Synthetic Dopamine-Responsive Riboswitch for in Vitro Biosensing Svetlana Harbaugh
641046 A Programmable Probiotic Encapsulation System Enhances Therapeutic Delivery In Vivo Tetsuhiro Harimoto
641359 Biological Signal Processing Filters Via Engineering Allosteric Transcription Factors Ashley Hersey
641498 Cell-Free Protein Expression Enables Rapid Single Chain Antibody Production and Characterization Steven Hoang-Phou
641065 Ultradeep Sequence-Function Mapping Enables Novel Insights into Bacterial Translation Simon Höllerer
641231 Transcriptional Programming in a Bacteroides Consortium Brian Huang
641250 A Modular Platform for Yeast Secretion of Biopolymers Kevin Huang
641717 Recreating the Mitochondrial Endosymbiosis That Gave Rise to Eukaryotes Cara Hull
641332 Genetically Encoded Stoichiometry As a Quick and Versatile Tool to Produce Multifunctional Protein Systems on Demand Barbara Jackova
641468 High-Throughput Characterization of Sars-Cov-2 Omicron Spike Protein Reveals Molecular Determinants of Immune Evasion Kamyab Javanmardi
641165 Ultrasonic Biosensors for Noninvasive Monitoring of Dynamic Intracellular Signals Zhiyang Jin
641709 Profiling of Putative Threonine Transaldolases for Biosynthesis of Non-Standard Amino Acids Michaela Jones
641499 Substrate-Functionalized Nanoparticles for Rapid Measurement of Enzyme Activity Nathaniel Kallmyer
641069 The Synthesizing Biology across Scales (SynBAS) Training Program – a Convergent Approach to Synthetic Biology Graduate Education Neha Kamat
641492 Modular and Programmable RNA Sensing Using Adar Editing in Living Cells Eerik Kaseniit
641475 Opencidar: Broad Host Range Moclo Vectors Unlock Standard Parts for Use in Non-Model Gram-Negatives Kevin Keating
 641167  Using DNA Methylation Analysis As a Tool to Develop in Vitro Models for Human Aging Studies Gautami Kelkar
640898 Expanding the Scope of Bacterial CRISPR Activation with PAM-Flexible dCas9 Variants Cholpisit Kiattisewee
641011 Engineering Bacteroides Thetaiotaomicron to Produce Non-Native Butyrate Based on a Genome-Scale Metabolic Model-Guided Design Kangsan Kim
641281 Computational Library Selection for Directed Evolution of the Ribosomal Active Site Camila Kofman
641280 Automated Model-Predictive Design of Synthetic Promoters to Control Transcriptional Profiles in Bacteria Travis La Fleur
641297 Protein-Generating Plastics: Embedding Cell-Free Systems in Polymer Materials Marilyn Lee
641252 GPCR Biosensing Modalities in Yeast Bettina Lengger
641457 A Multiplexed and Composable In Vivo dna Assembly Platform Sasha Levy
641109 Designing, Building and Characterizing a Cell-Free Biosensor Signal Amplification Circuit Using T7 Rnap Promoter-Independent Transcription Jenni Li
641445 Engineering Tardigrade Intrinsically Disordered Proteins (IDPs) to Improve Cell Desiccation Tolerance Samuel Lim
641282 A Portable Regulatory RNA Array Design Enables Tunable and Complex Regulation across Diverse Bacteria Baiyang Liu
641017 Investigating the Role of the Arginine Dihydrolase Pathway on Synthetic Human Gut Microbial Assembly and Mammalian Host Colonization Yiyi Liu
641159 A p-Coumaroyl-CoA Biosensor for Dynamic Regulation of Naringenin Biosynthesis in Saccharomyces Cerevisiae  Dany Liu
641326 New Soil Synthetic Biology Tools: Controlling Information Flow through Living Environmental Materials Using Volatile Gas Signals Li Chieh Lu
641310 Advancing Engineered Endosymbionts As a Platform Technology for Therapeutic Macrophage Modulation Cody S. Madsen
641206 The Crisparator: A Synthetic Feedback Controller in Mammalian Cells for Robust Protein Production. Alessio Mallozzi
641722 Protein Engineering for Enhanced Microbially-Induced Calcite Precipitation (MICP) Joshua Mancini
641173 Utilizing Enzymatic Pathways to Break Environmental and Financial Synthesis Limitations in DNA Based Data Storage Systems Karishma Matange
641256 Engineering Scalable Genetic Neural Networks for Biological Pattern Recognition James McLellan
641155 Identification, Selection, and Characterization of Alcohol Exporters to Improve Biofuel Tolerance in Pseudomonas Putida Russel Menchavez
641471 An Emulsion-Based, High-Throughput Screen for Engineering a Template-Independent Polymerase Marija Milisavljevic
641387 Performance Prediction of Fundamental Transcriptional Programs Prasaad Milner
640963 From Empirical to Data Driven Host Selection: An Expression System to Facilitate Chassis Screening Vivienne Mol
640828 A De Novo Matrix for Macroscopic Living Materials from Bacteria Sara Molinari
641160 Screening Tolerance to Acetic Acid through a Novel Acetic Acid Biosensor Maurizio Mormino
641296 Writing Data Onto Blank Template DNA Afsaneh Sadremomtaz
641711 Genoscaler™: A New Platform for High Throughput Strain Engineering Han Nguyen
641182 A Split Ribozyme RNA Detection Platform That Converts Native RNA Signals into Orthogonal Protein Outputs Lauren Gambill
640953 Engineered Transcription Factors and Logic Gates to Enhance Heavy Metal Biosensor Design in Bacillus Subtilis Jasdeep Ghataora
641469 A Standardized Fluorescent Palate Derived from a Singe Protein Scaffold Andrew Gilmour
641337 RNA-Based Platforms for Improving Enzymatic Reactions In Vivo Martin Gobry
641415 3D Printing Bacteria in Support Slurries for Complex Free-Standing Structures Ram Surya Gona
641215 Engineered Cell Differentiation and Sexual Reproduction in Probiotic and Mating Yeasts Emil Damgaard Jensen

Session/Rapid-Fire C - Wednesday, May 4  5:30 - 8:30
ID Abstract Title Presenting Author
641223 Discovery and Engineering of Bacteria for Plastic Upcycling Una Nattermann
641233 Plasmid Crosstalk in Cell-Free Expression Systems Fernanda Piorino Macruz de Oliveira
641450 Expansion of the Ecoflex Modular Cloning Toolkit for Post-Transcriptional Regulation with RNA-Protein Devices. Michael Truong-Giang Nguyen
641343 Assessing Antiviral Drugs with Persia - Direct Cell-Free Measurement of Transcription, Translation, and Viral Enzyme Activity Peter Carr
641463 Transcriptome Profiling of Peptide Nucleic Acid Treatment in Carbapenem-Resistant E. coli reveals Novel Antisense Targets Nolan O'Connor
641008 Live Biotherapeutics for Chronic Disease Management Murali Panchapagesa Muthuswamy
641346 Utilizing RNA Origami Scaffolds for In Vivo Characterization of Fluorescent Light-up RNA Aptamers Georgios Pothoulakis
641277 Filamentous Fungal Toolkit and Onboarding Pipeline Randi Pullen
641249 Inference of Microbial Interaction Modes from Community Dynamics Yili Qian
641214 Engineering the Next Generation of Biosensors in Mammalian Cells Francesco Ragazzini
640961 Synch: Design, Screening, and Analysis of a Synthetic Cyclic β-Hairpin Peptide Library for Antibiotic Potential Justin Randall
641293 Autonomous Platform for Protein Design Jacob Rapp
641489 Effects of Sequence Features on Machine Learned Enzyme Classification Fidelity Sakib Ferdous
641723 Mapping the Functional Sequence Network of Trpb Using Continuous Evolution Gordon Rix
641055 Engineering High Complexity Genetic Circuits Using Many-Regulator CRISPR Interference Arrays Morgan Roggenbaum
641051 Using the S. Cerevisiae mitochondrial Ribosome As an Orthogonal Evolvable Translation System Brooke Rothschild-Mancinelli
641286 Promoter Design Using Artificial Intelligence for Diverse Skin Bacteria Pavana Rotti
640972 Constructing a Tunable RNA Gradient Generator Using Photopatterned Hydrogels Misha Rubanov
641323 A Novel Thermophilic Enzyme for DNA Based Error Correction Rushant Sabnis
641448 Thermostable Enzymes for Error Correction of DNA Rushant Sabnis
641435 Directed Evolution Improves the Catalytic Efficiency of Tev Protease Mateo Sanchez Lopez
641117 Analysis of 3’ UTR Modifications Using Streamlined Plasmid Production and Cell Growth Systems Lauren Saunders
641276 Recombinase Based Switches in Genetic Circuitry Ada Scarrott
641150 Characterizing 100 Cotranscriptionally Encoded RNA Strand Displacement Design Permutations for Engineering Biology Samuel W. Schaffter
641364 A Modular Synthetic Biology Toolkit for Actinobacteria Nathan Schwalm
641163 Optogenetic Control of Antibiotic Resistance Genes Michael Sheets
641393 Next-Generation Biotic Memory - Intercepting Recombinase Function Andrew Short
641094 Opticoli: Self-Assembled Bacterial Microlenses for Optical Applications Lynn Sidor
640967 gRNA-Seqret Version 2: Genome Wide Guide RNA Design and Sequence Extraction Tool for Any Genome Lisa Simirenko
641671 Endogenous Versus External Regulation of the Mevalonate Pathway in E. coli Eric J. South
641456 Diving into Novel Marine Chassis: A Synthetic Biology Toolkit for Roseobacters Swetha Sridhar
640989 Logical Reversibility Using Synthetic Gene Circuits with Living Cells Rajkamal Srivastava
641430 Engineering Algae-Made Biotherapeutics: Towards the Humanization of the N-Linked Glycosylation Pathway in the Microalgae Phaeodactylum Tricornutum Emily Stuckless
641396 Development of a Cell-Free Biosensor for Detection of Cadmium in Water Meghna Thakur
641502 Interrogating the Function of Bicistronic Ribosome Binding Sites for Reliable Gene Expression in Bacteria Ross Thyer
641220 Quantification of Microbial Robustness to Compare Strains and Cell Functions Cecilia Trivellin
641210 Quantitative Characterisation and Modelling of Genetic AND-Gates: From Robust Molecular Models to Predictive Design of Synthetic Gene Circuits Lucie Troisi
641446 Investigating the Insertion Tolerance of Flavodoxins through Laboratory Evolution Albert Truong
641702 Transformation-Mediated Chromosome Synthesis and Replacement in Eukaryotic Cells Alessandro Luis Venega Coradini
641204 Efficient Multiplexed Gene Regulation in Saccharomyces Cerevisiae Using dCas12a René Verwaal
641222 Loica 1.2: Genetic Network Design Automation for Spatio-Temporal Patterns Gonzalo A. Vidal Peña
641320 Engineering a Modular Bacterial Crispra Platform to Expand Target Range, Uncover New Properties, and Activate Endogenous Gene Expression across Bacteria Maria Claudia Villegas Kcam
641324 Protease-Controlled Secretion and Display of Intercellular Signals Alexander Vlahos
641426 A Multiplex Platform for Small RNA Sequencing Elucidates Multifaceted tRNA Stress Response and Translational Regulation Chris Watkins
641449 Understanding Sequence-Structure-Function Relationships in Sulfite Reductases Using Protein Engineering Elizabeth Windham
640734 Xport Entrap: A Droplet Microfluidic Platform for Enhanced DNA Transfer between Microbial Species Jose Wippold
640531 Modulating Protein-Protein Interactions through Phage-Assisted Continuous Evolution Victoria Xie
641151 In Situ Manipulation of Microbial Interactions Via Conjugative Delivery of CRISPR-Cas9: An Experimental and Numerical Investigation Aaron Yip
640736 Protocell Arrays for Simultaneous Detection of Diverse Analytes Yan Zhang
641290 Engineering Riboflavin Synthesis in Escherichia coli for Multichannel Bioelectronic Sensing Xu Zhang
641295 Ultrahigh-Throughput Single-Cell Genetic Profiling of Bacterial Populations Freeman Lan
641493 Detangling DNA: Balancing Biophysical Tradeoffs Drives Cellular Reprogramming Kate Galloway
640968 Optimization of Cell-Free Heavy Metal Sensors for Detection in Field-Relevant Conditions  Kathryn Beabout
641292 Encapsulation in Bilayer Vesicles Enables Robust and Tunable Performance of a Cell-Free Riboswitch

Margrethe Boyd